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PHYSIOLOGY AND METABOLISM

In Vivo Expression from the RpoS-Dependent P1 Promoter of the Osmotically Regulated proU Operon inEscherichia coli and Salmonella entericaSerovar Typhimurium: Activation by rho andhns Mutations and by Cold Stress

K. Rajkumari, J. Gowrishankar
K. Rajkumari
Centre for Cellular and Molecular Biology, Hyderabad 500 007, and
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J. Gowrishankar
Centre for Cellular and Molecular Biology, Hyderabad 500 007, and
Centre for DNA Fingerprinting and Diagnostics, Hyderabad 500 076, India
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DOI: 10.1128/JB.183.22.6543-6550.2001
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    Fig. 1.

    Description of plasmids used for studies of in vivo expression from the proU P1 promoter. The line on top depicts the proximal region of the proU operon, and the positions of the cis regulatory elements (namely, P1, P2, and the NRE) are marked relative to that of its first structural gene, proV. Nucleotide number designations are given, with the start site of P1 transcription taken as +1. Solid bars, in the vicinity of P1 and within the NRE, mark the positions of bent-DNA motifs in this region. The box with vertical stripes depicts the location of a 22-base C-rich segment on the P1-initiated transcript ofS. enterica(S.e.). The sequence of this segment fromS. enterica and from E.coli (E.c.) is shown above the line. Beneath are represented (by the individual open bars) the extents of DNA from the proU regulatory region carried upstream of the lacZ reporter gene in the single-copy-number plasmids (whose pHYD number designations, and abbreviated descriptions, are given alongside) that were used for the in vivo expression studies. Deletion of the 22-base region in pHYD374 is denoted by the interrupted line segment. Note that the P2 promoter in each of the plasmids pHYD394 and pHYD395 has been mutationally inactivated.

Tables

  • Figures
  • Table 1.

    List of E. coli K-12 strainsa

    StrainMutation(s)
    GJ11proU224::lac
    GJ862Nil
    GJ863rho
    GJ866hns
    GJ867rho hns
    GJ870rpoS
    GJ871rho rpoS
    GJ872hns rpoS
    GJ873rho hns rpoS
    GJ884csiD::lac
    GJ885csiD::lac rho
    GJ887csiD::lac rho rpoS
    GJ888osmY::lac
    GJ889osmY::lac rho
    GJ891osmY::lac rho rpoS
    GJ2733csiD::lac rpoS
    GJ2734osmY::lac rpoS
    GJ2739csiD::lac hns
    GJ2741osmY::lac hns
    GJ2743proU224::lac rpoS
    GJ2745hfq-2
    GJ2746hfq-1
    GJ2748hfq-1 hns
    GJ2750csiD::lac hns rpoS
    GJ2751osmY::lac hns rpoS
    GJ2752hfq-1 hns rpoS
    • ↵a All listed strains are F−and, with the exception of GJ11 (15), were constructed in this study. All strains are derivatives of MC4100 (15), and mutations for each in addition to those present in this strain are listed. Genotype designations are as in the work of Berlyn (6). The complete genotype of MC4100 is Δ(argF-lac)U169 rpsL 150 relA1 araD139 flbB5301 deoC1 ptsF25. Allele numbers of the listed mutations and the strains (sources) from which they were transferred by P1 transduction are as follows: rho, rho-4(Am) from CGSC5072 (E. coli Genetic Stock Center); hns, hns-206::Ap from PD32 (12); rpoS, rpoS359::Tn10 from RH90 (5);csiD::lac, csiD::λplacMu15 from DW12 (5);osmY::lac (previously calledcsi-5::lac),osmY::λplacMu55 from RO151-a (5); hfq-1, hfq-1::Ω from TX2822 (M. E. Winkler strain derived from TX2808 [53]); and hfq-2, hfq-2::Ω from TX2765 (M. E. Winkler strain derived from TX2758 [53]).

  • Table 2.

    proU P1-lac expression at 30 and 10°Ca

    Temp and GJrpoS+ strain no.dMutation(s)β-Galactosidase sp act for P1-lac-bearing plasmid (description) onrpoS+ strainb
    pHYD373 (S. entericaP1)pHYD374 (S. entericaP1Δatt)pHYD275 (E. coliP1.a)pHYD380 (E. coliP1.b)pHYD394 (E. coliP1-P2∗- NRE.a)pHYD395 (E. coliP1-P2∗- NRE.b)
    −NaCl+NaCl−NaCl+NaCl−NaCl+NaCl−NaCl+NaCl−NaCl+NaCl−NaCl+NaCl
    30°C
     862 (870)Nil4 (<1)4 (<1)60 (2)111 (<1)63 (4)275 (8)51 (5)277 (8)3 (2)6 (3)2 (1)6 (3)
     863 (871)rho51 (<1)69 (3)136 (5)159 (4)126 (15)322 (18)73 (13)291 (16)4 (3)11 (4)3 (2)8 (6)
     866 (872)hns5 (3)7 (2)391 (3)301 (4)407 (16)620 (22)349 (35)NDc75 (8)112 (14)58 (10)168 (15)
     867 (873)rho hns58 (5)82 (2)472 (7)331 (5)393 (27)500 (38)NDND 106 (27)207 (41)80 (23)251 (35)
    10°C
     862 (870)Nil54 (2)22 (2)728 (6)288 (4)962 (16)665 (16)NDND 5 (4)8 (7)5 (1)10 (1)
     863 (871)rho463 (35)277 (20)917 (67)427 (38)885 (69)667 (47)NDND 114 (17)136 (13)136 (22)175 (13)
    • ↵a Isogenic rpoS+and rpoS cultures were grown in trimethoprim-supplemented K-tryptone medium without NaCl (−NaCl) or with 0.3 M NaCl (+NaCl) at 30 or 10°C for β-galactosidase assays. Enzyme specific activity values are reported in Miller units (35). Values in parentheses are for rpoS derivatives.

    • ↵b Plasmid descriptions are as explained in Fig.1 and its legend.

    • ↵c ND, not determined.

    • ↵d Strain numbers outside and within parentheses designate isogenic rpoS+ and rpoSderivatives, respectively.

  • Table 3.

    lac expression from control promotersosmY and csiDa

    lac fusionβ-Galactosidase sp act for rpoS+ and rpoS strains in medium at tempb:
    K-tryptoneLBON
    30°C10°C30°C10°C
    w.t.rhohnsw.t.rhow.t.rhohnsw.t.rho
    osmY::lac376 (14)171 (30)287 (NDc)587 (20)334 (216)43 (12)78 (ND)257 (12)835 (36)489 (ND)
    csiD::lac522 (64)195 (12)372 (ND)251 (33)258 (18)110 (10)80 (4)96 (4)37 (10)152 (39)
    • ↵a The following GJ strains were used in the experiment, given in the order wild type (w.t.), rhomutant, and hns mutant for each with the isogenicrpoS derivatives indicated in parentheses:osmY::lac, 888 (2734), 889 (891), and 2741 (2751); csiD::lac, 884 (2733), 885 (887), and 2739 (2750).

    • ↵b Cultures of the variousrpoS+ and isogenic rpoS strains were grown in trimethoprim-supplemented K-tryptone or LBON medium at 30 or 10°C for β-galactosidase assays. Enzyme specific activity values are reported in Miller units (35). Values in parentheses are for rpoS derivatives.

    • ↵c ND, not determined.

  • Table 4.

    lac expression from pHYD275 (E. coli P1.a) in hfq mutantsa

    StrainMutationβ-Galactosidase sp act at temp:
    30°C10°C
    GJ862Nil123839
    GJ2746hfq-124243
    GJ2745hfq-285750
    • ↵a Cultures of the indicated strains carrying plasmid pHYD275 were grown in trimethoprim-supplemented K-tryptone medium at 30 or 10°C for β-galactosidase assays. Enzyme specific activity values are reported in Miller units (35).

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In Vivo Expression from the RpoS-Dependent P1 Promoter of the Osmotically Regulated proU Operon inEscherichia coli and Salmonella entericaSerovar Typhimurium: Activation by rho andhns Mutations and by Cold Stress
K. Rajkumari, J. Gowrishankar
Journal of Bacteriology Nov 2001, 183 (22) 6543-6550; DOI: 10.1128/JB.183.22.6543-6550.2001

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In Vivo Expression from the RpoS-Dependent P1 Promoter of the Osmotically Regulated proU Operon inEscherichia coli and Salmonella entericaSerovar Typhimurium: Activation by rho andhns Mutations and by Cold Stress
K. Rajkumari, J. Gowrishankar
Journal of Bacteriology Nov 2001, 183 (22) 6543-6550; DOI: 10.1128/JB.183.22.6543-6550.2001
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KEYWORDS

Acute-Phase Proteins
Amino Acid Transport Systems
Bacterial Proteins
Carrier Proteins
DNA-binding proteins
Escherichia coli
Escherichia coli Proteins
Salmonella Typhimurium
sigma factor

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