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GENE REGULATION

YycH Regulates the Activity of the Essential YycFG Two-Component System in Bacillus subtilis

Hendrik Szurmant, Kristine Nelson, Eun-Ja Kim, Marta Perego, James A. Hoch
Hendrik Szurmant
The Scripps Research Institute, 10550 N. Torrey Pines Rd., La Jolla, California 92037
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Kristine Nelson
The Scripps Research Institute, 10550 N. Torrey Pines Rd., La Jolla, California 92037
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Eun-Ja Kim
The Scripps Research Institute, 10550 N. Torrey Pines Rd., La Jolla, California 92037
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Marta Perego
The Scripps Research Institute, 10550 N. Torrey Pines Rd., La Jolla, California 92037
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James A. Hoch
The Scripps Research Institute, 10550 N. Torrey Pines Rd., La Jolla, California 92037
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  • For correspondence: hoch@scripps.edu
DOI: 10.1128/JB.187.15.5419-5426.2005
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  • FIG. 1.
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    FIG. 1.

    The essential yycFG two-component system is organized in either of two different operons. Essential genes are in gray. Sequences encoding for putative transmembrane regions are in black. RR, response regulator; HK, histidine kinase; ?, unknown; ‘β-lac’, homologous to enzyme family which includes β-lactamases; protease, serine protease.

  • FIG. 2.
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    FIG. 2.

    YycF-dependent expression in yycH, yycI, yycJ, and yycK mutant strains. Shown are growth in optical density (OD) units (solid lines and solid symbols) and β-galactosidase activity in Miller units (broken lines and open symbols) of strains expressing lacZ from the amyE locus under control of the YycF-dependent yocH promoter. Strains are wild type (squares), yycH (triangles), yycI (circles), yycJ (diamonds), and yycK (stars).

  • FIG. 3.
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    FIG. 3.

    YycF-dependent expression in JH25002 (yycH::pJM103) versus JH25011 (yycH::pJM117) strains. In strain JH25011, the genes downstream of yycH within the same operon are placed under control of the IPTG inducible PSpac promoter. Shown are growth in optical density (OD) units (solid lines and solid symbols) and β-galactosidase activity in Miller units (broken lines and open symbols) of strains expressing lacZ from the amyE locus under control of the YycF-dependent yocH promoter. Strains are wild type (squares), JH25002 (triangles), and JH25011 in the presence of 1 mM IPTG (circles) or in its absence (diamonds).

  • FIG. 4.
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    FIG. 4.

    Cell wall defect in yycH strains is independent of yocH expression. Whole-cell protein extract after treatment with or without lysozyme, separated by SDS-PAGE and visualized by Coomassie staining. Extract was from wild type (lane 1), JH25002 (yycH) (lane 2), JH25012 (yocH) (lane 3), JH25013 (yych yocH) (lane 4), and JH25011 (yycH::pJM117) in the presence (lane 5) or absence (lane 6) of 1 mM IPTG.

  • FIG. 5.
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    FIG. 5.

    Time-dependent expression of YycF and YycG in wild-type and yycH strains. Shown are immunoblots visualizing expression levels of YycF and YycG in wild-type and yycH liquid cultures at indicated times before or after the onset of stationary phase.

  • FIG. 6.
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    FIG. 6.

    YycH gets exported to the extracellular space. MH3402 (phoA phoB) harboring pMA5-yycH′-′phoA or pMA5-′phoA were streaked over a plate containing 50 μg/ml of the alkaline phosphatase substrate 5-bromo-4-chloro-3-indolyl-phosphate. Blueish-green indicates a Pho+ phenotype.

  • FIG. 7.
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    FIG. 7.

    Model of the YycG-dependent balancing act. YycH (dark gray) gets exported to the extracellular space, where it down-regulates YycG (black) activity in order to keep growth and cell wall levels at the optimum (middle). In the absence of YycG, cells die because of a shift of the equilibrium toward the unphosphorylated form of the response regulator YycF (white) and, therefore, reduced expression of the YycF regulon (left). Cells show cell wall and growth defects in the absence of YycH, likely due to a shift in the equilibrium toward the phosphorylated form of YycF and, therefore, overexpression of the YycF regulon (right).

Tables

  • Figures
  • TABLE 1.

    Plasmids and strains used in this study

    Plasmid or strainDescription or genotypeSource or reference
    Plasmids
        pIC133mini-Tn10-OS delivery vector, Ermr, Spcr22
        pJM103Ampr, Cmr20
        pJM115amyE integration vector for lacZ fusions, Ampr Kanr2
        pJM117pMUTIN 4 derivative, Ampr CmrM. Perego, unpublished
        pJM134Spcr gene in pBluescript (Stratagene) Ampr SpcrM. Perego, unpublished
        pMA5B. subtilis/E.coli shuttle vector3
        pJV211pJM103-′phoA3
        pJV217pMA5-kapBC26P′-′phoA3
        pJC11pJM103-′yycH′5
        pJC12pJM103-′yycI′5
        pJC13pJM103-′yycJ′5
        pJC14pJM103-′yycK′5
        pYOCHPpJM115-PYocH-lacZThis work
        pJS01pJM103-yycH′-′phoAThis work
        pJS02pMA5-yycH′-′phoAThis work
        pJS03pJM117-′yycH′This work
        pJS04pJM117-′yycH′ ΔlacZThis work
        pJS05pJM134-′yocH′This work
    Strains
        E. coli
            DH5αCloning hostLab stock
            TG1Cloning hostLab stock
        B. subtilis
            MH3402pheA1 trpC2 phoA::cat phoB::mTn10F. M. Hulett
            JH642pheA1 trpC2Lab stock
            JH17038pheA1 yycFH215PThis work
            JH17041leu-8 met-5 yycFH215P5
            JH25001amyE::(PyocH-lacZ aph3-A)This work
            JH25002yycH::pJC11 amyE(PyocH-lacZ aph3-A)This work
            JH25003yycI::pJC12 amyE(PyocH-lacZ aph3-A)This work
            JH25004yycJ::pJC13 amyE(PyocH-lacZ aph3-A)This work
            JH25005yycK::pJC14 amyE(PyocH-lacZ aph3-A)This work
            JH25011yycH::pJS03 amyE(PyocH-lacZ aph3-A)This work
            JH25012yocH::pJM134 amyE(PyocH-lacZ aph3-A)This work
            JH25013yocH::pJM134 yycH::pJC11 amyE(PyocH-lacZ aph3-A)This work
            JH25014phoA::cat phoB::mTn10 pJS04This work
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YycH Regulates the Activity of the Essential YycFG Two-Component System in Bacillus subtilis
Hendrik Szurmant, Kristine Nelson, Eun-Ja Kim, Marta Perego, James A. Hoch
Journal of Bacteriology Jul 2005, 187 (15) 5419-5426; DOI: 10.1128/JB.187.15.5419-5426.2005

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YycH Regulates the Activity of the Essential YycFG Two-Component System in Bacillus subtilis
Hendrik Szurmant, Kristine Nelson, Eun-Ja Kim, Marta Perego, James A. Hoch
Journal of Bacteriology Jul 2005, 187 (15) 5419-5426; DOI: 10.1128/JB.187.15.5419-5426.2005
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