ERRATA
Global Phylogeny of Mycobacterium tuberculosis Based on Single Nucleotide Polymorphism (SNP) Analysis: Insights into Tuberculosis Evolution, Phylogenetic Accuracy of Other DNA Fingerprinting Systems, and Recommendations for a Minimal Standard SNP Set
Ingrid Filliol, Alifiya S. Motiwala, Magali Cavatore, Weihong Qi, Manzour Hernando Hazbón, Miriam Bobadilla del Valle, Janet Fyfe, Lourdes García-García, Nalin Rastogi, Christophe Sola, Thierry Zozio, Marta Inírida Guerrero, Clara Inés León, Jonathan Crabtree, Sam Angiuoli, Kathleen D. Eisenach, Riza Durmaz, Moses L. Joloba, Adrian Rendón, José Sifuentes-Osornio, Alfredo Ponce de León, M. Donald Cave, Robert Fleischmann, Thomas S. Whittam, David Alland
Ingrid Filliol
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Alifiya S. Motiwala
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Magali Cavatore
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Weihong Qi
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Manzour Hernando Hazbón
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Miriam Bobadilla del Valle
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Janet Fyfe
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Lourdes García-García
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Nalin Rastogi
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Christophe Sola
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Thierry Zozio
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Marta Inírida Guerrero
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Clara Inés León
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Jonathan Crabtree
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Sam Angiuoli
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Kathleen D. Eisenach
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Riza Durmaz
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Moses L. Joloba
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Adrian Rendón
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
José Sifuentes-Osornio
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Alfredo Ponce de León
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
M. Donald Cave
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Robert Fleischmann
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
Thomas S. Whittam
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
David Alland
Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenço Center for the Study of Emerging and Re-emerging Pathogens, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, New Jersey; National Food Safety and Toxicology Center, Michigan State University, East Lansing, Michigan; The Institute for Genomic Research, Rockville, Maryland; Central Arkansas Veterans Healthcare System (CAVHS), Departments of Pathology, Microbiology-Immunology, and Neurobiology and Developmental Sciences, University of Arkansas for Medical Sciences, Little Rock, Arkansas; Department of Infectious Diseases, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, and Unidad de Tuberculosis Instituto Nacional de Salud Publica, Mexico City, and Pulmonary Services, University Hospital of Monterrey, Universidad Autónoma de Nuevo León, Nuevo León, Mexico; Victorian Mycobacterium Reference Laboratory, Victorian Infectious Diseases Reference Laboratory, North Melbourne, Victoria 3051, Australia; Unité de la Tuberculose et des Mycobactéries, Institut Pasteur de Guadeloupe, Morne Jolivère, F-97183 Abymes-Cedex, Guadeloupe; Grupo de Micobacterias, Subdirección de Investigación, Instituto Nacional de Salud, Bogotá, Colombia; Department of Clinical Microbiology, Faculty of Medicine, Inonu University, Malatya, Turkey; and Departments of Medicine and Medical Microbiology, Makerere University, Kampala, Uganda
DOI: 10.1128/JB.188.8.3162-3163.2006
Volume 188, no. 2, p. 759-772, 2006. Page 762: Figure 3 should appear as shown on the following page.
- Copyright © 2006 American Society for Microbiology
Global Phylogeny of Mycobacterium tuberculosis Based on Single Nucleotide Polymorphism (SNP) Analysis: Insights into Tuberculosis Evolution, Phylogenetic Accuracy of Other DNA Fingerprinting Systems, and Recommendations for a Minimal Standard SNP Set
Ingrid Filliol, Alifiya S. Motiwala, Magali Cavatore, Weihong Qi, Manzour Hernando Hazbón, Miriam Bobadilla del Valle, Janet Fyfe, Lourdes García-García, Nalin Rastogi, Christophe Sola, Thierry Zozio, Marta Inírida Guerrero, Clara Inés León, Jonathan Crabtree, Sam Angiuoli, Kathleen D. Eisenach, Riza Durmaz, Moses L. Joloba, Adrian Rendón, José Sifuentes-Osornio, Alfredo Ponce de León, M. Donald Cave, Robert Fleischmann, Thomas S. Whittam, David Alland
Journal of Bacteriology Apr 2006, 188 (8) 3162-3163; DOI: 10.1128/JB.188.8.3162-3163.2006
Global Phylogeny of Mycobacterium tuberculosis Based on Single Nucleotide Polymorphism (SNP) Analysis: Insights into Tuberculosis Evolution, Phylogenetic Accuracy of Other DNA Fingerprinting Systems, and Recommendations for a Minimal Standard SNP Set
Ingrid Filliol, Alifiya S. Motiwala, Magali Cavatore, Weihong Qi, Manzour Hernando Hazbón, Miriam Bobadilla del Valle, Janet Fyfe, Lourdes García-García, Nalin Rastogi, Christophe Sola, Thierry Zozio, Marta Inírida Guerrero, Clara Inés León, Jonathan Crabtree, Sam Angiuoli, Kathleen D. Eisenach, Riza Durmaz, Moses L. Joloba, Adrian Rendón, José Sifuentes-Osornio, Alfredo Ponce de León, M. Donald Cave, Robert Fleischmann, Thomas S. Whittam, David Alland
Journal of Bacteriology Apr 2006, 188 (8) 3162-3163; DOI: 10.1128/JB.188.8.3162-3163.2006
