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MOLECULAR BIOLOGY OF PATHOGENS

FliZ Regulates Expression of the Salmonella Pathogenicity Island 1 Invasion Locus by Controlling HilD Protein Activity in Salmonella enterica Serovar Typhimurium

Jessica E. Cott Chubiz, Yekaterina A. Golubeva, Dongxia Lin, Lucas D. Miller, James M. Slauch
Jessica E. Cott Chubiz
1Department of Microbiology
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Yekaterina A. Golubeva
1Department of Microbiology
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Dongxia Lin
1Department of Microbiology
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Lucas D. Miller
1Department of Microbiology
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James M. Slauch
1Department of Microbiology
2College of Medicine, University of Illinois, Urbana, Illinois 61801
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  • For correspondence: slauch@illinois.edu
DOI: 10.1128/JB.00635-10
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  • FIG. 1.
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    FIG. 1.

    Model for the Salmonella pathogenicity island 1 (SPI1) regulatory network. The expression of hilA, the master regulator for SPI1, is controlled by HilD, HilC, and RtsA, which act in a complex feed-forward loop. Each can independently activate expression of their own gene as well as each other and hilA. Signals are integrated by HilD; HilC and RtsA act as amplifiers of those signals. For clarity, the genes encoding HilD, HilC, RtsA, and HilA are not shown. The solid arrows indicate direct gene activation. T3SS, type three secretion system.

  • FIG. 2.
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    FIG. 2.

    FliZ activates hilA through hilD. β-Galactosidase (β-Gal) activity was examined in strains containing hilA-lacZ transcriptional fusions and the indicated plasmids and/or mutations. The strains were grown under SPI1-inducing conditions. β-Galactosidase activity units are defined as (micromoles of ONP formed per minute × 103)/(OD600 × milliliter of cell suspension) and are reported as means ± standard deviations (error bars) for four replicate samples relative to the results for the wild-type (WT) strain. The strains used were JS749, JS778, JS946, JS798 to JS807, JS947, and JS948.

  • FIG. 3.
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    FIG. 3.

    FliZ activation of hilA is dependent on HilD. (A) β-Galactosidase activity in strains containing a hilA-lacZ transcriptional fusion and the indicated mutations after growth under SPI1-inducing conditions. (B) β-Galactosidase activity of strains containing a hilA-lacZ transcriptional fusion and indicated mutations with rtsA under the control of a tetracycline-regulated promoter. The strains were grown under SPI1-inducing conditions with the indicated concentrations of tetracycline (Tet). The strains used were JS749 and JS950 to JS956. β-Galactosidase activity units are defined as (μmol of ONP formed per min × 103)/(OD600 × ml of cell suspension) and are reported as means ± standard deviations (n = 4).

  • FIG. 4.
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    FIG. 4.

    FliZ acts at the level of HilD protein. (A) β-Galactosidase activity in strains containing either a hilD-lacZ transcriptional or translational fusion and the indicated plasmids. The fusion joints of the two constructs are identical (14). The strains were grown under SPI1-inducing conditions with 10 mM arabinose. Arabinose is required for induction of pHilC but was included in all cultures. The strains used were JS883, JS957, JS958, JS892, JS959, and JS960. (B) β-Galactosidase activity in strains containing a hilA-lacZ transcriptional fusion and the indicated mutations. The strains were grown under SPI1-inducing conditions (left panel) or in LB medium (0.5% NaCl) with the indicated tetracycline concentrations and with shaking (right panel). The strains used were JS749, JS778, JS633, JS961, JS962, and JS963. β-Galactosidase activity units are defined as (μmol of ONP formed per min × 103)/(OD600 × ml of cell suspension) and are reported as means ± standard deviations (n = 4).

  • FIG. 5.
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    FIG. 5.

    FliZ regulates hilA independently of HilE and RpoS. (A) β-Galactosidase activity in strains containing a hilA-lacZ transcriptional fusion and the indicated mutations after growth under SPI1-inducing conditions. The strains used were JS749, JS576, JS577, JS579, JS633 to JS636, and JS964 to JS967. (B) β-Galactosidase activity of strains containing sodCII, katE, or hilA transcriptional fusions in otherwise wild-type or rpoS backgrounds with or without pFliZ. The strains were grown under SPI1-inducing conditions. The strains used were JS749, JS968, JS969, JS970, JS909, JS910, JS971, JS972, JS531, JS541, JS973, and JS974. β-Galactosidase activity units are defined as (μmol of ONP formed min−1) × 103/(OD600 × ml of cell suspension) and are reported as means ± standard deviations (n = 4).

  • FIG. 6.
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    FIG. 6.

    HilD protein levels in relation to FliZ and HilE. The hilD-3×FLAG construct is under tetRA control, and all strains contained a hilA-lacZ transcriptional fusion and the indicated mutations or plasmids. (A) HilD protein levels in stationary-phase cells. The strains were grown under SPI1-inducing conditions with 0.4 μg/ml tetracycline. The cultures were divided to determine β-galactosidase activity and to perform the Western blot analysis to detect FLAG-tagged HilD. Extracts from equal concentrations of cells were loaded on the gel. The intensities of the bands were quantified using ImageJ and are presented above the gel relative to the wild-type strain (set at 1). Note that the doublets seen are artifacts of this particular gel. The strains used were JS975 to JS979. (B) HilD protein stability in cells in late log phase. The genotypes for lon and fliZ strains are indicated to the left of the gels (++ indicates overproduction [pFliZ]). The cells were induced with 0.8 μg/ml tetracycline and grown in LB medium (0.5% NaCl) with shaking to late log phase, and antibiotics were added to stop transcription and translation. β-Galactosidase activity produced from the hilA-lacZ fusion in the samples shown on these gels was determined from each sample taken at time zero. ImageJ was used for half-life analysis. The half-life was calculated from 2 (lon) or 3 replicates of the experiments. The mean half-life ± SEM is listed for each background. The strains used were JS975, JS976, JS977, JS980, and JS981.

  • FIG. 7.
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    FIG. 7.

    FliZ regulates HilD in the absence of Lon protease. (A) β-Galactosidase activity in strains containing a hilA-lacZ transcriptional fusion and various mutations or pFliZ as indicated. The strains were grown under SPI1-inducing conditions. The strains used were JS749 and JS982 to JS985. (B) Immunoprecipitation of FliZ-3×FLAG. Strains produced either wild-type FliZ or 3×FLAG-tagged FliZ as indicated in lon + or lon mutant backgrounds. The cultures were grown under SPI1-inducing conditions. FLAG-tagged protein was immunoprecipitated from lysates from equal concentrations and numbers of cells. The proteins were separated by SDS-PAGE and subjected to Western blot analysis to detect FLAG-tagged protein. The strains used were 14028, JS987, JS988, and JS989.

Tables

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  • TABLE 1.

    Salmonella strains and plasmids used in this study

    Salmonella straina or plasmidRelevant genotype or phenotypeDeletion endpointsbSource or reference
    Salmonella strains
        14028Wild typeATCCc
        JS135 zii8104::Tn10dTc 45
        JS481Δ(invH-avrA)2916::Kn 13
        JS531Φ(sodCII′-lac+)110 21
        JS541ΔrpoS1191::Tc Φ(sodCII′-lac +)110 21
        JS576ΔhilD114::Cm attλ::pDX1::hilA′-lacZ 18
        JS577ΔhilC113::Cm attλ::pDX1::hilA′-lacZ 18
        JS579ΔrtsA5 attλ::pDX1::hilA′-lacZ 18
        JS633ΔhilE115::aadA attλ::pDX1::hilA′-lacZ 18
        JS634ΔhilD114::Cm ΔhilE115::aadA attλ::pDX1::hilA′-lacZ 18
        JS635ΔhilC113::Cm ΔhilE115::aadA attλ::pDX1::hilA′-lacZ 18
        JS636ΔrtsA5 ΔhilE115::aadA attλ::pDX1::hilA′-lacZ 18
        JS749 attλ::pDX1::hilA′-lacZ 30
        JS778ΔfliZ8042::Tc attλ::pDX1::hilA′-lacZ 30
        JS798 attλ::pDX1::hilA′-lacZ/pWKS30 30
        JS799 attλ::pDX1::hilA′-lacZ/pFliZ 30
        JS800 fliZ8042::Tc attλ::pDX1::hilA′-lacZ/pWKS30 30
        JS801 hilD114::Km attλ::pDX1::hilA′-lacZ/pWKS30 30
        JS802 rtsA5::Km attλ::pDX1::hilA′-lacZ/pWKS30 30
        JS803 hilC113::Cm attλ::pDX1::hilA′-lacZ/pWKS30 30
        JS804 fliZ8042::Tc attλ::pDX1::hilA′-lacZ/pFliZ 30
        JS805 hilD114::Km attλ::pDX1::hilA′-lacZ/pFliZ 30
        JS806 rtsA5::Km attλ::pDX1::hilA′-lacZ/pFliZ 30
        JS807 hilC113::Cm attλ::pDX1::hilA′-lacZ/pFliZ 30
        JS883Φ(hilD′-lac +)139 3017867-3018727This study
        JS892Φ(hilD′-′lacZ)hyb139 3017867-3018727This study
        JS902ΔkatE11::Cm1397114-1399406 27
        JS909Φ(katE′-lac +)11 27
        JS910ΔrpoS1191::Tc Φ(katE′-lac +)11 27
        JS940Δ(wza-wcaM)4201::Kn2202646-2180030This study
        JS941ΔfliZ8042::Cm2044136-2044684This study
        JS942ΔflhDC8044::Kn2022215-2021141This study
        JS943 hilD-3×FLAG-Kn3018761-3018773This study
        JS944 tetRA-hilD 3017792-3017800This study
        JS945 tetRA-rtsA 4561798-4561830This study
        JS946ΔflhDC8044::Kn attλ::pDX1::hilA′-lacZ This study
        JS947ΔflhDC8044::Kn attλ::pDX1::hilA′-lacZ/pWKS30This study
        JS948ΔflhDC8044::Kn attλ::pDX1::hilA′-lacZ/pFliZThis study
        JS950ΔfliZ8042::Cm attλ::pDX1::hilA′-lacZ This study
        JS951ΔhilD138::Kn attλ::pDX1::hilA′-lacZ This study
        JS952ΔfliZ8042::Cm ΔhilD138::Kn attλ::pDX1::hilA′-lacZ This study
        JS953 tetRA-rtsA attλ::pDX1::hilA′-lacZ This study
        JS954ΔfliZ8042::Cm tetRA-rtsA attλ::pDX1::hilA′-lacZ This study
        JS955ΔhilD138::Kn tetRA-rtsA attλ::pDX1::hilA′-lacZ This study
        JS956ΔfliZ8042::Cm ΔhilD138::Kn tetRA-rtsA attλ::pDX1::hilA′-lacZ This study
        JS957Φ(hilD′-lac +)139/pFliZThis study
        JS958Φ(hilD′-lac +)139/pHilCThis study
        JS959Φ(hilD′-′lacZ)hyb139/pFliZThis study
        JS960Φ(hilD′-′lacZ)hyb139/pHilCThis study
        JS961 tetRA-hilD attλ::pDX1::hilA′-lacZ This study
        JS962ΔfliZ8042::Kn tetRA-hilD attλ::pDX1::hilA′-lacZ This study
        JS963ΔhilE115::aadA tetRA-hilD attλ::pDX1::hilA′-lacZ This study
        JS964ΔfliZ8042::Tc ΔhilE115::aadA attλ::pDX1::hilA′-lacZ This study
        JS965ΔhilD114::Cm ΔfliZ8042::Tc ΔhilE115::aadA attλ::pDX1::hilA′This study
        JS966ΔhilC113::Cm ΔfliZ8042::Tc ΔhilE115::aadA attλ::pDX1::hilA′This study
        JS967ΔrtsA5 ΔfliZ8042::Tc ΔhilE115::aadA attλ::pDX1::hilA′This study
        JS968ΔrpoS::Cm attλ::pDX1::hilA′-lacZ This study
        JS969 attλ::pDX1::hilA′-lacZ /pFliZThis study
        JS970ΔrpoS::Cm attλ::pDX1::hilA′-lacZ/pFliZThis study
        JS971Φ(katE′-lac +)11/pFliZThis study
        JS972ΔrpoS1191::Tc Φ(katE′-lac +)11/pFliZThis study
        JS973Φ(sodCII′-lac +)110/pFliZThis study
        JS974ΔrpoS1191::Tc Φ(sodCII′-lac +)110/pFliZThis study
        JS975 tetRA-hilD-3×FLAG attλ::pDX1::hilA′-lacZ/pWKS30This study
        JS976ΔfliZ8042 tetRA-hilD-3×FLAG attλ::pDX1::hilA′-lacZ::Kn/pWKS30This study
        JS977ΔfliZ8042 tetRA-hilD-3×FLAG attλ::pDX1::hilA′-lacZ::Kn/pFliZThis study
        JS978ΔhilE115::aadA tetRA-hilD-3×FLAG attλ::pDX1::hilA′-lacZ/pWKS30This study
        JS979ΔhilE115::aadA tetRA-hilD-3×FLAG attλ::pDX1::hilA′-lacZ/pHilEThis study
        JS980Δlon::Kn Δ(wza-wcaM)4201 tetRA-hilD-3×FLAG attλ::pDX1::hilA-′lacZ/pWKS30This study
        JS981Δlon::Kn Δ(wza-wcaM)4201 tetRA-hilD-3×FLAG attλ::pDX1::hilA-′lacZ/pFliZThis study
        JS982Δ(wza-wcaM)4201 attλ::pDX1::hilA′-lacZ This study
        JS983Δlon::Kn Δ(wza-wcaM)4201 attλ::pDX1::hilA′-lacZ This study
        JS984ΔfliZ8042::Cm Δlon::Kn Δ(wza-wcaM)4201 attλ::pDX1::hilA′-lacZ This study
        JS985Δlon::Kn Δ(wza-wcaM)4201 attλ::pDX1::hilA′-lacZ/pFliZThis study
        JS987 fliZ-3×FLAG2044137-2044139This study
        JS988Δlon::Kn505552-507860This study
        JS989Δlon::Kn fliZ-3×FLAGThis study
        JS990ΔfliZ8042::Cm zii8104::Tn10dTcThis study
        JS991ΔfliZ8042::Cm Δ(invH-avrA)2916::KnThis study
    Plasmids
        pWKS30pSC101 origin; Apr 54
        pFliZ (pDX2)pWKS30::fliZ + 30
        pHilC (pLS119) bla PBAD hilC-myc-His pACYC184 origin 41
    • ↵ a All Salmonella strains are isogenic derivatives of S. enterica serovar Typhimurium strain 14028.

    • ↵ b Numbers indicate the base pairs that are deleted (inclusive) as defined in the S. enterica serovar Typhimurium LT2 genome sequence (National Center for Biotechnology Information).

    • ↵ c ATCC, American Type Culture Collection.

  • TABLE 2.

    Role of FliZ during infection

    Infection routeInoculum (CFU)Genotype of straina: Median CIbP valuecNo. of mice
    AB
    i.p.d 103 ΔfliZ WT1.08NS9
    Orale 107 ΔfliZ WT0.016<0.00511
    109 ΔfliZ Δspi1 Δspi1 0.2<0.00516
    • ↵ a The strains used were JS135, JS990, JS481, and JS991.

    • ↵ b The competitive index (CI) was calculated as described in Materials and Methods.

    • ↵ c The Student t test was used to compare the CIs to the inocula. NS, not significant.

    • ↵ d Bacteria were recovered from the spleen in the case of intraperitoneal (i.p.) competition assays.

    • ↵ e Bacteria were recovered from the distal portion of the small intestine in oral competition assays.

Additional Files

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  • Supplemental material

    Files in this Data Supplement:

    • Supplemental file 1 - Fig. S1, β-galactosidase activity in strains containing hilA-lacZ transcriptional fusions
      PDF file, 36K.
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FliZ Regulates Expression of the Salmonella Pathogenicity Island 1 Invasion Locus by Controlling HilD Protein Activity in Salmonella enterica Serovar Typhimurium
Jessica E. Cott Chubiz, Yekaterina A. Golubeva, Dongxia Lin, Lucas D. Miller, James M. Slauch
Journal of Bacteriology Nov 2010, 192 (23) 6261-6270; DOI: 10.1128/JB.00635-10

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FliZ Regulates Expression of the Salmonella Pathogenicity Island 1 Invasion Locus by Controlling HilD Protein Activity in Salmonella enterica Serovar Typhimurium
Jessica E. Cott Chubiz, Yekaterina A. Golubeva, Dongxia Lin, Lucas D. Miller, James M. Slauch
Journal of Bacteriology Nov 2010, 192 (23) 6261-6270; DOI: 10.1128/JB.00635-10
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KEYWORDS

Bacterial Proteins
Gene Expression Regulation, Bacterial
Salmonella Typhimurium
transcription factors
virulence factors

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