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Research Article | Spotlight

Flagellar Structures from the Bacterium Caulobacter crescentus and Implications for Phage ϕCbK Predation of Multiflagellin Bacteria

Eric J. Montemayor, Nicoleta T. Ploscariu, Juan C. Sanchez, Daniel Parrell, Rebecca S. Dillard, Conrad W. Shebelut, Zunlong Ke, Ricardo C. Guerrero-Ferreira, Elizabeth R. Wright
George O'Toole, Editor
Eric J. Montemayor
aDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, USA
bCryo-Electron Microscopy Research Center, Department of Biochemistry, University of Wisconsin, Madison, Wisconsin, USA
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Nicoleta T. Ploscariu
aDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, USA
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Juan C. Sanchez
aDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, USA
cBiophysics Graduate Program, University of Wisconsin, Madison, Wisconsin, USA
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Daniel Parrell
aDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, USA
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Rebecca S. Dillard
dDivision of Infectious Diseases, Department of Pediatrics, Emory University School of Medicine, Children’s Healthcare of Atlanta, Atlanta, Georgia, USA
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Conrad W. Shebelut
eDepartment of Pathology and Laboratory Medicine, Emory University School of Medicine, Atlanta, Georgia, USA
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Zunlong Ke
dDivision of Infectious Diseases, Department of Pediatrics, Emory University School of Medicine, Children’s Healthcare of Atlanta, Atlanta, Georgia, USA
fSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, Georgia, USA
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Ricardo C. Guerrero-Ferreira
dDivision of Infectious Diseases, Department of Pediatrics, Emory University School of Medicine, Children’s Healthcare of Atlanta, Atlanta, Georgia, USA
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Elizabeth R. Wright
aDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, USA
bCryo-Electron Microscopy Research Center, Department of Biochemistry, University of Wisconsin, Madison, Wisconsin, USA
cBiophysics Graduate Program, University of Wisconsin, Madison, Wisconsin, USA
dDivision of Infectious Diseases, Department of Pediatrics, Emory University School of Medicine, Children’s Healthcare of Atlanta, Atlanta, Georgia, USA
gMorgridge Institute for Research, Madison, Wisconsin, USA
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George O'Toole
Geisel School of Medicine at Dartmouth
Roles: Editor
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DOI: 10.1128/JB.00399-20
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ABSTRACT

Caulobacter crescentus is a Gram-negative alphaproteobacterium that commonly lives in oligotrophic fresh- and saltwater environments. C. crescentus is a host to many bacteriophages, including ϕCbK and ϕCbK-like bacteriophages, which require interaction with the bacterial flagellum and pilus complexes during adsorption. It is commonly thought that the six paralogs of the flagellin gene present in C. crescentus are important for bacteriophage evasion. Here, we show that deletion of specific flagellins in C. crescentus can indeed attenuate ϕCbK adsorption efficiency, although no single deletion completely ablates ϕCbK adsorption. Thus, the bacteriophage ϕCbK likely recognizes a common motif among the six known flagellins in C. crescentus with various degrees of efficiency. Interestingly, we observe that most deletion strains still generate flagellar filaments, with the exception of a strain that contains only the most divergent flagellin, FljJ, or a strain that contains only FljN and FljO. To visualize the surface residues that are likely recognized by ϕCbK, we determined two high-resolution structures of the FljK filament, with and without an amino acid substitution that induces straightening of the filament. We observe posttranslational modifications on conserved surface threonine residues of FljK that are likely O-linked glycans. The possibility of interplay between these modifications and ϕCbK adsorption is discussed. We also determined the structure of a filament composed of a heterogeneous mixture of FljK and FljL, the final resolution of which was limited to approximately 4.6 Å. Altogether, this work builds a platform for future investigations of how phage ϕCbK infects C. crescentus at the molecular level.

IMPORTANCE Bacterial flagellar filaments serve as an initial attachment point for many bacteriophages to bacteria. Some bacteria harbor numerous flagellin genes and are therefore able to generate flagellar filaments with complex compositions, which is thought to be important for evasion from bacteriophages. This study characterizes the importance of the six flagellin genes in C. crescentus for infection by bacteriophage ϕCbK. We find that filaments containing the FljK flagellin are the preferred substrate for bacteriophage ϕCbK. We also present a high-resolution structure of a flagellar filament containing only the FljK flagellin, which provides a platform for future studies on determining how bacteriophage ϕCbK attaches to flagellar filaments at the molecular level.

FOOTNOTES

    • Received 8 July 2020.
    • Accepted 2 December 2020.
    • Accepted manuscript posted online 7 December 2020.
  • Supplemental material is available online only.

  • Copyright © 2021 American Society for Microbiology.

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Flagellar Structures from the Bacterium Caulobacter crescentus and Implications for Phage ϕCbK Predation of Multiflagellin Bacteria
Eric J. Montemayor, Nicoleta T. Ploscariu, Juan C. Sanchez, Daniel Parrell, Rebecca S. Dillard, Conrad W. Shebelut, Zunlong Ke, Ricardo C. Guerrero-Ferreira, Elizabeth R. Wright
Journal of Bacteriology Feb 2021, 203 (5) e00399-20; DOI: 10.1128/JB.00399-20

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Flagellar Structures from the Bacterium Caulobacter crescentus and Implications for Phage ϕCbK Predation of Multiflagellin Bacteria
Eric J. Montemayor, Nicoleta T. Ploscariu, Juan C. Sanchez, Daniel Parrell, Rebecca S. Dillard, Conrad W. Shebelut, Zunlong Ke, Ricardo C. Guerrero-Ferreira, Elizabeth R. Wright
Journal of Bacteriology Feb 2021, 203 (5) e00399-20; DOI: 10.1128/JB.00399-20
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KEYWORDS

Caulobacter crescentus
bacteria
bacteriophage
cryo-electron microscopy
cryo-electron tomography
flagellum
helical reconstruction
single particle

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