Table 1.

Genes (ORFs and tRNAs) of bacteriophage 933W

LabelGeneStart posi-tionStop posi-tionOrien-tationLength of product (amino acids)Comments
L0061 int 136329<444Integrase
L0062 xis 16911392<99Excisionase?
L006320731762<103
L006424982133<121
L006530332410<207
L006633243037<95
L006735443326<72
L006838333546<95
L006948764103<257Ehly homolog (λ Ea22)
L007054745193<93λ orf-61 homolog
L007156765485<63λ orf-63 homolog
L007258375649<62λ orf-60a homolog
L0073 exo 65085831<225
L0074 bet 72906505<261
L0075 gam 75927296<98
L0076 kil 79377668<89
L0077 cIII79447780<54
L0078 ssb 83858017<122
L007990068536<156
L0080 N 94489065<127
L0081101019937<54
L0082 stk 1115010104<348
L00831160511144<153
L00841201411673<113
L0085 cI1278212075<235
L0086 cro 1286113088>75
L0087 cII1322713523>98
L0088 O 1355614494>312
L0089 P 1449115192>233
L0090 ren 1518915479>96
L00911555015828>92
L00921599716356>119
L00931638016826>148λ nin orf-146 homolog
L00941682317350>175DNA methylase?
L00951753218581>349
L0096 roi 1872719455>242
L00971945520060>201λ nin orf-204 homolog
L00982005720251>64λ nin orf-68 homolog
L0099 Q 2020520678>157
L0100 ileZ 2112021195>Proposed tRNA-Ile
L0101 argN 2120521281>Proposed tRNA-Arg
L0102 argO 2129521371>Proposed tRNA-Arg
L0103 stxA2 2146222421>319Shiga toxin 2 subunit A; also sltIIA
L0104 stxB2 2243322702>89Shiga toxin 2 subunit B; also sltIIB
L01052318925126>645 E. coli yjhS homolog
L01062530725753>148
L0107 S 2583026045>71
L0108 R 2605026583>177
L0109 ant 2685427423>189
L0110 Rz 2757728041>154
Rz1 2779727982>61Homolog of λ ORF overlapping Rz
L0111 bor 2836628073<97
L01122877529581>268Terminase, small subunit?
L01132956231268>568Terminase, large subunit?
L01143126833412>714Portal protein?
L01153357034577>335
L01163460135815>404
L01173587136260>129
L01183628336771>162
L01193664737318>223
L01203731837968>216
L01213796539902>645Tail fiber
L01223978440173>129
L01234022040501>93
L01244071842421>567
L01254241843686>422
L01264375243979>75
L01274398544602>205
L0128 lom 4469345427>244
L01294585746258>133
L01304635247008>218
L01314701147457>148
L01324746747718>83
L01334772948994>421
L01344902557445>2,806
L01355772857916>62
L01365834057996<114
L0137 hokW 5861558460<51 gef-hokC-relFhomolog
mokW 5867258460<70Longer ORF, same frame as hokW
L0138 sokW 5866458734>Antisense RNA
L01395937658906<156
L01406020059301<299
L01416041860197<73
L01426109560466<209