Bacterial strains and plasmids
Strain or plasmid | Relevant characteristicsa | Source or reference |
---|---|---|
Strains | ||
P. putida | ||
G7 | Wild-type strain containing the NAH7 catabolic plasmid | 3 |
G7.C1 | NAH7-cured derivative of G7 | D. T. Gibson |
G7 Y1 | nahY::Km mutant | This work |
E. coli | ||
DH5α | F−λ− recA1Δ(lacZYA-argF)U169 hsdR17 thi-1 gyrA96 supE44 endA1 relA1 φ80lacZΔM15 | Gibco-BRL |
S17-1 | thi pro hdsR hdsM+ recAchromosomal insertion of RP4-2(Tc::Mu Km::Tn7) | 14 |
Plasmids | ||
pBBR1-MCS2 | Kmr; multicopy broad-host-range vector | 9 |
pBBR1-MCS5 | Gmr; multicopy broad-host-range vector | 9 |
pLAFR1 | Tcr; low-copy-number broad-host-range cosmid | 4 |
pSUP102::Gm | Gmr Cmr; suicide vector in Pseudomonas | 13 |
pUC19 | Apr; ColE1 replicon | 19 |
pHG59 | Kmr; pBBR1-MCS2 containing a 5.9-kbEcoRI fragment from NAH7b | This work |
pHG60 | Kmr; pBBR1-MCS2 containing a 4-kbSmaI-EcoRI fragment from pHG59 cloned intoHincII-EcoRI sites | This work |
pHG70 | Apr; the insert of pHG60 is cloned into theKpnI-BamHI sites of pUC19, resulting inEcoRI sites on either side of the insert | This work |
pHG95 | Apr Kmr; pHG70 with the 3′ end of nahY removed with NsiI and replaced with a GenBlock Kmr cassette from Pharmacia that had been digested with PstI | This work |
pHG97 | KmrGmr; the EcoRI insert of pHG95 (containingnahY::Km) cloned into pSUP102::Gm | This work |
pHG100 | Tcr; pLAFR1 containing a 25-kb EcoRI fragment from NAH7b | 5 |
pHG125 | Gmr; 1.7-kb BsiWI fragment from pHG59 that contains nahY introduced into theAcc651 (KpnI) site of pBBR1-MCS5 | This work |