Table 2.

Comparison of overlapping coding sequences from fosmid 101G10 and fosmid 60A5

Gene nameaFunctional category% Identity
NucleotideAmino acid
Hypothetical 01Unknown81.476.6
23STranslation99.16
16STranslation99.3
GSATHeme biosynthesis83.283.8
Hypothetical 02Unknown83.481.4
ORF 01Unknown83.385.7
ORF 02Unknown89.995.2
ORF 03Unknown87.986.7
tRNATyrTranslation99.2
ORF 04Unknown87.888.1
TIMGlycolysis80.983.3
TBPTranscription83.486.3
DNA polymeraseReplication/repair89.093.9
dCMP deaminasePyrimidine synthesis85.789.8
RNA helicase (ATP dependent)Translation86.192.2
PPIChaperone88.492.5
Hypothetical 03Unknown91.592.4
MenAMenaquinone biosynthesis8689.4
ORF 05Unknown87.590.6
MethylaseRestriction/modification86.487.5
  • a Hypothetical, ORF with similarity to proteins of unknown function from the databases; ORF, open reading frame identified by similarity between both fosmids, including upstream promoter sequence; TIM, triosephosphate isomerase; PPI, peptidylprolylcis,trans-isomerase.