Table 2.

P. aeruginosa PAO1 potential genes which likely encode proteins containing the HCD

ORFPositionaPredicted size of gene product
kDaAmino acid residues
tlpA ATG282182/280224TAG69.8652
tlpB ATG321757/323367TGA57.7536
tlpC ATG373201/374880TGA61.8559
tlpD ATG523573/524928TAG51.1451
tlpE ATG713912/715537TGA58.5541
piJb ATG1622181/1620139TGA72.5682
tlpF ATG1867469/1868653TGA43.2394
tlpGb ATG1871671/1873710TGA72.6679
tlpHb ATG2628762/2626819TAA69.7647
tlpI ATG2822989/2821370TAG57.8541
ctpLb ATG2899931/2898031TAG68.4632
tlpJ ATG3137228/3155090TAG76.6712
tlpKb GTG3273964/3275985TAG72.3673
pctCb ATG3500156/3498435TGA68.6633
pctAb ATG3502450/3500543TGA68.0629
pctBb ATG3506342/3504444TGA68.3632
tlpLb ATG3523500/3525116TAG58.4538
tlpM GTG4185369/4186997TGA59.0542
tlpNb ATG5061480/5063117TGA58.3545
tlpO ATG5118106/5116634TGA51.5490
tlpPb ATG5191707/5193302TGA56.4531
tlpQ ATG5334256/5332112TGA77.1714
tlpR ATG5335954/5337639TGA60.3561
tlpS ATG5427096/5428703TGA57.7535
ctpHb ATG5442805/5441099TGA61.7568
tlpTb ATG6227481/6226186TGA47.9431
  • a Numbers indicate the first and last nucleotides of start and stop codons, respectively, and correspond to the PAO1 genome sequence (http://www.pseudomonas.com).

  • b Genes which were insertionally inactivated by using a kan cassette in this study.