Table 2.

X24509-specific sequence informationa

NameGC %Homolog product (range)Identity (%)
LX453.11tRNA-splicing endonuclease positive effector of Schizosaccharomyces pombe(1512–1707)28
LX555.00Posterior end mark of Ciona savignyi (224–325)26
LX5RIntegrase of Actinobacillus actinomycetemcomitans (7–77)25
LX766.05Lytic enzyme of Pseudomonas aeruginosa (1–209)62
LX960.41Gag of human endogenous retrovirus K (168–352)26
LX1050.34Cap5F of Staphylococcus aureus (150–367)42
LX1259.781–400, PAO1 sequence, others, putative homeobox protein of Macaca mulatta (56–89)43
LX12RProtein kinase B ofPseudomonas aeruginosa (106–151)45
LX1559.05FGF homolog of Drosophila melanogaster(509–598)32
LX1663.82Calcium channel alpha1 subunit of Homo sapiens (907–1003)33
LX1763.79Polymerase of rice ragged stunt virus (453–512)37
LX1863.96Tn4652 transposase ofPseudomonas putida (820–876)31
LX1954.79Heat shock protein HtrC of Escherichia coli (48–156)27
LX2164.59Homeodomain protein ofHomo sapiens (172–213)38
LX2357.89Probable membrane protein YDR221w of Saccharomyces cerevisiae(453–546)23
LX24 61.65 Putative oxidoreductase of Streptomyces coelicolor(140–337) 31
LX24R Polyketide synthase ofStreptomyces ambofaciens (499–558) 35
LX2646.09MTG8-related protein of Homo sapiens (413–448)38
LX2965.16Homeobox protein ofHomo sapiens (73–140)49
LX29RNo hit
LX3059.46Hypothetical protein 2 (PicA 5′ region) ofAgrobacterium tumefaciens (5–80)31
LX30RPAO1 sequence
LX3149.65PAO1 sequence
LX31RPeptide synthetase of Claviceps purpurea(51–110)30
LX3256.7951–377, pilin biogenesis protein (PilB) of Pseudomonas aeruginosa 97
384–701, pilin biogenesis protein (PilC) of Pseudomonas aeruginosa 76
LX32R22–753, pilin biogenesis protein (PilC) of Pseudomonas aeruginosa 73
LX3556.74Outer membrane protein of Campylobacter jejuni (82–242)27
LX3652.76Probable membrane protein YMR317w of Saccharomyces cerevisiae (424–512)42
LX3750.31Putative cell division protein ofEscherichia coli (7–289)38
LX3848.9920-β-hydroxysteroid dehydrogenase ofStreptomyces exfoliatus (30–153)33
LX3952.24Regulatory protein mnt of Bacteriophage P22 (1–36)50
LX40 60.20 Hypothetical protein Rv3633 of Mycobacterium tuberculosis(120–262) 38
LX40R Putative oxidoreductase ofStreptomyces coelicolor (286–398) 33
LX41 61.65 Hypothetical protein Rv3854c of Mycobacterium tuberculosis(188–413) 53
LX41R PpdK of Mycobacterium tuberculosis (94–171) 35
LX4253.24Putative DNA-binding protein of Arabidopsis thaliana (359–390)50
LX4359.59Intestinal mucin ofHomo sapiens (156–206)44
LX46 61.78 LipG ofMycobacterium tuberculosis (218–382) 47
LX46R LipG of Mycobacterium tuberculosis (11–159) 41
LX4754.66Reverse gyrase of Pyrococcus furiosus(93–148)39
LX4850.0720-β-hydroxysteroid dehydrogenase of Streptomyces exfoliatus (8–189)31
LX4954.14Receptor interacting protein 140 of Mus musculus (513–600)26
LX5061.84Polyketide synthase of Streptomyces hygroscopicus (4400–4489)29
LX5157.08Hypothetical protein Rv3574 of Mycobacterium tuberculosis (32–182)28
LX5262.00Late expression factor 8 of Lymantria dispar nucleopolyhedrovirus (614–637)50
LX5349.70Putative protein ofArabidopsis thaliana (167–196)46
LX5464.376-Deoxyerythronolide B synthase II ofSaccharopolyspora erythraea (2678–2745)36
LX5549.67KIAA0350 of Homo sapiens(352–389)43
LX5769.67DNA topoisomerase I ofPhysarum polycephalum (81–170)35
LX5861.25VgrG protein of Escherichia coli(378–585)34
LX5952.19Annexin XI of Mus musculus (132–187)42
LX6052.38Etr-3 ofXenopus laevis (204–334)21
LX6162.38Lactate dehydrogenase of Neisseria meningitidis (314–358)36
LX6256.11SLM-2 of Mus musculus (219–266)39
LX6366.4Chitinase of Emericella nidulans(426–604)24
LX6450.00No hit
LX6659.00Long ORF of TT virus (26–81)34
LX6756.562-Isopropylmalate synthase of Schizosaccharomyces pombe (15–201)54
LX6856.86IS911 hypothetical protein, variant (IS911A) of Escherichia coli (14–108)49
LX6959.14Putative transposase subunit of Pseudomonas alcaligenes (45–130)33
LX7057.00Chitinase ofEmericella nidulans (362–446)30
LX7258.50Glycosyltransferase of Pseudomonas aeruginosa (157–237)59
LX7367.57Uptake hydrogenase of Rhodobacter sphaeroides (136–220)31
LX7441.57Ribosomal maturase of Rhododendron edgeworthii (159–274)29
  • a Bold type indicates the sequences of the four clones which were used to screen the cosmid library. Ranges show positions in base pairs. R, sequence from the other end of M13 clone.