TABLE 1.

Strain information and the percentage of SL1344 genes present for each strain

StrainSGSC no.DescriptionSubspeciesETaDesignation in this studyNo. of arrays% SL1344 genes present
SL1344Typhimurium (strain on array)ISL13443100.0
SARA 12182TyphimuriumITm1Tm12100.0
LT2Sequenced TyphimuriumILT2399.9
SARA 62186TyphimuriumITm2Tm2299.5
SARA 532233Paratyphi BIPb3Pb3293.8
SARB 482505Paratyphi CIPc1Pc1393.7
SARB 162473EnteritidisIEn1En1393.4
SARB 122469DublinIDu1Du1393.0
SARB 42461CholeraesuisICs1Cs1392.8
SARA 412221Paratyphi BIPb1Pb1292.2
CT18Sequenced TyphiICT18391.5
SARB 632520TyphiITp1Tp1391.1
SARB 512508PullorumIPu3Pu3391.1
TY2Lab TyphiITY2391.0
SARB 642521TyphiITp2Tp2390.4
1 PAWild type Paratyphi AI1PA289.8
SARB 582515SendaiISe1Se1289.7
SARB 212478GallinarumIGa2Ga2389.7
SARB 422499Paratyphi AIPa1Pa1389.2
SARC 113100S. bongoriV1Bg383.7
SARC 123103S. bongoriV2Bg383.4
SARC 53061ArizonaIIIaAz377.5
2323ArizonaIIIaAz2323176.4
2335ArizonaIIIaAz2335176.3
2334ArizonaIIIaAz2334174.7
5705AArizona (clinical isolate)IIIaAz5705A173.5
  • a ET, electrophoretic type. This refers to the electrophoretic profile of the isolate with regard to a number of metabolic enzymes. A particular serovar can have multiple electrophoretic types depending on the number of alleles that are present for any given enzyme that is assayed.