TABLE 2.

Comparison of GIL16c, GIL01, and pBClin15 predicted gene products

GIL16c ORFNo. of residues (positions)GIL01pBClin15aPutative function
ORF (% identity with GIL16cORF)No. of residues (positions)ORFs (% identity with GIL16cORF)No. of residues (positions)
163 (360-551)
156 (355-531)1 (98.3)58 (356-532)
2166 (547-1047)2 (85)167 (548-1051)2 (86.5)167 (532-1035)
375 (1119-1343)3 (95.8)74 (1123-1347)3 (46.5)71 (1110-1325)
4245 (1402-2139)4 (91.4)245 (1406-2143)4 (36.1)233 (1390-2091)
5753 (2069-4330)5 (97.3)735 (2127-4334)5 (47.5)729 (2104-4293)DNA polymerase
666 (4347-4547)6 (100)68 (4350-4550)6 (89.2)66 (4296-4496)LexA-like repressor
758 (4561-4737)7 (53.2)50 (4564-4718)7 (59.2)49 (4512-4661)
648 (4709-4831)
957 (4950-5123)
884 (4820-5074)
9125 (5040-5417)10 (64.7)145 (5136-5573)8 (45.1)115 (4780-5127)
10248 (5243-5989)11 (79.8)252 (5387-6145)9 (38.8)243 (4938-5669)
1180 (5835-6077)12 (90.1)80 (5991-6233)10 (47.6)81 (5515-5760)
12102 (6046-6354)13 (74.5)102 (6202-6510)11 (61)106 (5729-6049)
13212 (6335-6973)14 (77.6)212 (6491-7129)12 (58.4)216 (6021-6671)DNA-packaging protein
1446 (6988-7126)15 (100)46 (7144-7284)13 (78.3)46 (6684-6824)
1545 (7106-7243)
1646 (7264-7404)16 (91.3)46 (7301-7441)14 (74.4)45 (6839-6976)
1789 (7406-7675)17 (65.2)84 (7443-7697)
18356 (7675-8745)18 (92.1)356 (7697-8767)15 (65.1)355 (6980-8047)
1976 (8787-9017)19 (98.1)76 (8809-9039)16 (47.8)76 (8088-8318)
2052 (9021-9179)20 (27)68 (9043-9249)17 (30.8)79 (8255-8454)
2135 (9213-9320)
22143 (9253-9684)21 (97.9)143 (9329-9760)18 (63)140 (8568-8990)
2358 (9681-9857)22 (100)58 (9757-9933)19 (69.6)58 (8991-9167)
2448 (9854-10000)23 (100)48 (9930-10076)20 (72.9)48 (9164-9310)
2591 (10012-10287)24 (96.7)91 (10088-10363)21 (37.8)94 (9316-9600)
26204 (10291-10905)25 (94.6)204 (10367-10981)22 (47)197 (9613-10206)
27250 (10909-11661)26 (95.6)250 (10981-11733)23 (74)243 (10210-10941)Lytic enzyme
28170 (11609-12121)27 (96.4)170 (11681-12193)24 (79.2)173 (10889-11410)
29297 (12135-13028)28 (73.1)304 (12206-13120)25 (24.9)264 (11423-12217)
30293 (13032-13913)29 (93.5)293 (13124-14005)
31288 (13855-14721)Lytic enzyme
26597 (12390-14183)
2795 (14195-14483)
30265 (14021-14818)28 (67.3)227 (14495-15179)Lytic enzyme
  • a The pBClin15 coordinates include the newly sequenced ITRs.