TABLE 2.

Classification of M. paratuberculosis K10 ORFs compared with other mycobacterial isolates

IsolateOrganismNo. of ORFs in classification:No. of ORFs measured% of total K10 ORFs
DivergentIntermediatePresent
MAA104M. avium subsp. avium2103552,9323,49780
6004M. avium subsp. avium1352512,7653,15172
6010M. intracellulare1304732,9943,59783
6006M. avium subsp. silvaticum77963,0383,21174
6058M. avium subsp. silvaticum1033042,7503,15773
2009M. avium subsp. paratuberculosis0492,7152,76464
4138M. avium subsp. paratuberculosis0923,3323,42479
10006M. avium subsp. paratuberculosis04582,6663,12472
19698M. avium subsp. paratuberculosis043,7963,80087
1091M. avium subsp. paratuberculosis0902,7202,81065
6079M. avium subsp. paratuberculosis042,9582,96268
4090M. avium subsp. paratuberculosis03982,6793,07771
KayM. avium subsp. paratuberculosis043,0563,06070
1434M. avium subsp. paratuberculosis003,0913,09171
19420M. smegmatis380a9315211,83242
  • a M. smegmatis ORFs were classified by using a 1.5-fold cutoff for the average ratio of hybridization intensities.