TABLE 1.

Bacterial strains

StrainRelevant genotype, plasmid, and/or phenotypeSource or reference
BW25141Δ(araD-araB)567 ΔlacZ4787 lacIp-4000(lacIq) Δ(phoB-phoR)580 galU95 ΔuidA3::pir+ rpoS396(Am) Δend::FRT rph-1 Δ(rhaD-rhaB)568 rnD3 pKD4 Apr Kanr12
BW25141Δ(araD-araB)567 ΔlacZ4787 lacIp-4000(lacIq) Δ(phoB-phoR)580 galU95 ΔuidA3::pir+ rpoS396(Am) Δend::FRT rph-1 Δ(rhaD-rhaB)568 rnD3 pKD3 Apr Cmr12
BW25113Δ(araD-araB)567 ΔlacZ4787 lacIp-4000(lacIq) Δ(phoB-phoR)580 rpoS396(Am) rph-1 Δ(rhaD-rhaB)568 rnD3 hsdR514 pKD46 Apr12
BT340supE44 ΔlacU169 (f80 lacZDM15) hsdR17 recA1 endA1 gyrA96 thi-1 relA1 pCP20 Apr10
KM44argE3 his4 leuB6 proA2 thr1 ara14 galK2 lacY1 mtl1 xyl5 thi1 rpsL31 tsx33 D(recC ptr recB recD)::Ptac-bet exo kan28
CAG12158MG1655 pheA18::Tn10 Tetr41
CAG37125ΔlacX74 galK galU Δ(araABC-leu)7679 araD139 hsdR rpsL mcrB rpoE::ΩCm nadB51::Tn10 Cmr TetrDe Las Peñas (unpublished)
CAG41241CAG45114 ΔyeaY::Cm CmrThis study
CAG41245CAG45114 ΔyraP::Cm CmrThis study
CAG41247CAG45114 ΔyeaYThis study
CAG41251CAG45115 ΔyraPThis study
CAG41254CAG45114 ΔnlpB::Cm CmrThis study
CAG41258CAG45114 ΔnlpBThis study
CAG41264KM44 pheA18::Tn10 TetrThis study
CAG41265CAG45114 surA::Cm CmrThis study
CAG41292CAG45114 degP::Km KmrThis study
CAG41293CAG45114 ΔyraP degP::Km KmrThis study
CAG41295CAG45114 ΔnlpB degP::Km KmrThis study
CAG41311CAG45114 ΔyraP ΔfkpA::Cm CmrThis study
CAG41313CAG45114 ΔnlpB ΔfkpA::Cm CmrThis study
CAG41318CAG45114 ΔfkpA::Cm CmrThis study
CAG41323CAG45114 Δskp zae502::Tn10 TetrThis study
CAG41324CAG45114 ΔyraP Δskp zae502::Tn10 TetrThis study
CAG41326CAG45114 ΔnlpB Δskp zae502::Tn10 TetrThis study
CAG41349CAG41264 lacZ::ptrc-b2595-bla Apr TetrThis study
CAG41350CAG45114 pCO109 AprThis study
CAG41351CAG45114 pCO10 AprThis study
CAG41356CAG41349 ΔyfiO::Cm Cmr Apr TetrThis study
CAG41408CAG45114 ΔyfeY::Cm CmrThis study
CAG41413CAG45114 ΔyfeYThis study
CAG41434CAG45114 ΔyfgL::Km CmrThis study
CAG41445CAG45114 ΔyfgLThis study
CAG41510CAG45114 pBA169 AprThis study
CAG41511CAG45114 pCO123 AprThis study
CAG41512CAG41251 pBA169 AprThis study
CAG41513CAG41251 pCO123 AprThis study
CAG41516CAG41445 pBA169 AprThis study
CAG41517CAG41445 pCO109 AprThis study
CAG41534CAG41258 pCO122 AprThis study
CAG41535CAG41258 pBA169 AprThis study
CAG41536CAG45114 pCO122 AprThis study
CAG41541CAG45114 ΔyraP ΔnlpB ΔyeaY yfeY::Cm yfgL::Km Cmr KmrThis study
CAG41543CAG45114 ΔyfgL degP::Km KmrThis study
CAG41544CAG45114 ΔyfgL Δskp zae502::Tn10 TetrThis study
CAG41551CAG45114 ΔfkpAThis study
CAG41552CAG45114 ΔfkpA::Cm Δskp zae502::Tn10 Cmr TetrThis study
CAG41553CAG45114 ΔfkpA::Cm degP::Km Cmr KmrThis study
CAG41554CAG45114 ΔfkpA surA::Cm CmrThis study
CAG41560CAG45114 Δskp degP::Km Cmr KmrThis study
CAG49001CAG45114 pKD46 Apr CmrThis study