Pupylated proteins identified in S. coelicolor
S. coelicolor gene locus | Protein name | Annotation | Detected pupylated peptide(s)a | Pupylated lysine | Mediumb | Orthologuec in: | Search engine(s)d | COG category | |||
---|---|---|---|---|---|---|---|---|---|---|---|
M. tuberculosis | M. smegmatis | R. erythropolis | C. glutamicum | ||||||||
SCO1814 | InhA/FabI | Putative enoyl-(acyl carrier protein) reductase | (R)DLGK(+243)QNIR(C) | K177 | R | Rv1484 | MSMEG_3151 | RER_30750 | cg2342 | MI | I |
SCO2090 | FtsI | Cell division protein | (K)TGTANRVDPATGK(+243)(Y) | K582 | R | Rv2163c | MSMEG_4233 | RER_35580 | cg2375 | M | M |
SCO2318 | Putative glycosyl transferase | (R)TEHPRAHLVVVGK(+243)(R) | K293 | R | MSMEG_6484 | cg0481 | M | M | |||
SCO2389 | AcpP | Acyl carrier protein | (M)AATQEEIVAGLAEIVNEIAGIPVEDVK(+43)LDK(+243)(S) | K31 | Y | Rv2244 | MSMEG_4326 | RER_36730 | cg2473 | MI | I |
SCO2390 | FabF | 3-Oxoacyl-(acyl carrier protein) synthase II | (R)K(+243)VLGDDVDHM(+16)AVSGTK(S) | K333 | R | Rv2246 | MSMEG_4328 | RER_36740 | cg3178 | MI | I |
SCO2950 | HupA | Nucleoid-associated heat-unstable (HU) protein | (K)DADAVLAAFAEVVGDIVSK(+43)GDEK(+243)(V), | K38 | Y | Rv2986c | MSMEG_2389 | MI | L | ||
(K)DADAVLAAFAEVVGDIVSK(+243)GDEK(V) | |||||||||||
(K)DADAVLAAFAEVVGDIVSKGDEK(+243)(V) | K42 | ||||||||||
SCO3373 | ClpC | Clp family ATP-binding protease | (K)IAGVRRDK(+243)(E) | K431 | R | Rv3596c | MSMEG_6091 | RER_06460 | cg3079 | M | O |
SCO3581 | Conserved hypothetical protein | (K)IVNPK(+243)VAGQAEGGR(V) | K134 | Y | Rv3688c | MSMEG_6214 | RER_04620 | cg0335 | MI | S | |
SCO3629 | PurA | Adenylosuccinate synthetase | (K)IGTTGRGIGPTYADK(+243)(I) | K139 | R | Rv0357c | MSMEG_0759 | RER_14280 | cg3063 | M | F |
SCO3878 | DnaN | DNA polymerase III, beta chain | (R)EFLWK(+243)PENPDISAVALVPAK(T) | K182 | Y | Rv0002 | MSMEG_0001 | RER_00020 | cg0004 | MI | L |
SCO4296 | GroEL2 | 60-kDa chaperonin 2 | (K)VTLGPKGRNVVLEK(+243)(K) | K41 | R/Y | Rv3417c | MSMEG_1583 | RER_19240 | cg3011 | M | O |
SCO4496 | Putative acetyltransferase | (R)FYESC(+57)GYK(+243)EVGRVPGAIR(V) | K147 | R/Y | MI | K | |||||
SCO4662 | Tuf1 | Elongation factor Tu-1 | (R)TVGAGQVTKINK(+243)(−) | K397 | R | Rv0685 | MSMEG_1401 | RER_17640 | cg0587 | MI | J |
SCO4762 | GroEL1 | 60-kDa chaperonin | (K)DDTTIVDGAGK(+243)RDEVQGR(I) | K338 | Y | Rv0440 | MSMEG_0880 | RER_15260 | cg3011 | MI | O |
(K)GQGFNAATGEYGDLVK(+243)AGVIDPVK(V) | K490 | ||||||||||
SCO5032 | AhpC | Alkyl hydroperoxide reductase | (K)GKEFQQINHK(+243)TYEGQWK(V) | K31 | R/Y | Rv2428 | MSMEG_4891 | RER_27870 | cg2736 | MI | O |
SCO5679 | Putative aldehyde dehydrogenase | (R)EAVDAGAK(+243)LLTGGK(R) | K351 | R | MSMEG_2163 | RER_44340 | cg0067 | M | C | ||
SCO5748 | OsaA | Putative sensory histidine kinase | (K)GDLSKKITVDAK(+243)(G) | K813 | R | cg0483 | M | T | |||
SCO6042 | Conserved hypothetical protein | (R)AGYADEVQELFDQLAAK(+243)DVTIR(G) | K62 | Y | Rv2676c | MSMEG_2782 | RER_28490 | cg2079 | MI | S | |
SCO7343 | HemC1 | Porphobilinogen deaminase 1 | (R)K(+243)LTDLPR(G) | K113 | R | Rv0510 | MSMEG_0953 | RER_16420 | cg0498 | MI | H |
SCO7442 | Putative uncharacterized protein | (K)AVSMSDPNKDTNK(+243)(K) | K22 | R | M | S |
↵a Amino acid modifications are indicated as follows: +16, oxidation; +57, carbamidomethyl; +43, carbamyl; +243, pupylation.
↵b Y, YEME medium; R, R2YE medium.
↵c Orthologous proteins detected as confirmed pupylated targets in mycobacterial, Rhodococcus, or Corynebacterium pupylomes (10, 11, 19, 25, 50) are underlined. Orthologous proteins identified in these organisms were obtained by a BLAST search through the MAGE genome browser (https://www.genoscope.cns.fr/agc/microscope/home/index.php).
↵d The search engine used was Mascot (M), InSpecT (I), or both (MI).