TABLE 6.

PCR identification of selected MAP island regions from 29 clinical isolates of M. avium subsp. paratuberculosis and M. avium subsp. avium collected from different states

Species and clinical isolateGenomic islanda
MAP-1MAP-3MAP-5MAP-12MAP-16MAP-17
M. avium subsp. paratuberculosis
    JTC33666++++++
    JTC33770++++++
    CW303++++++
    1B++++++
    3B++++++
    4B++++++
    5B++++++
    DT3+++++
    DT9+++++
    DT12++++++
    DT19++++++
    JTC1281+++++
    JTC1282+++++
    JTC1283+++++
    JTC1285+++
    JTC1286++++++
M. avium subsp. avium
    T93
    T99NA+++
    T100+NA+++
    DT30
    DT44
    DT78++
    DT84
    DT247+
    JTC956NANA++
    JTC982+
    JTC1161+NA++
    JTC1262
    JTC33793
  • a + or − denotes the presence or absence of genomic regions, while NA denotes no amplification of small or large DNA fragments.