TABLE 2.

List of genomic regions that displayed different hybridization signals determined using DNA microarrays designed from the genome of the M. avium subsp. avium 104 strain

IslandCoordinate (bp)aM. avium subsp. avium strain or isolatebPCR and sequence confirmation
StartEndk1019698HumanJTC981
1254,394294,226Yes
2461,414492,800Yes
3666,033675,725Yes
4747,095794,450Yes
51,421,7221,439,626+Yes
61,444,2051,463,365+Yes
71,795,2811,991,691+/−Yes
82,097,9072,100,883Yes
92,220,3202,241,163+/−Yes
102,259,1202,271,610Yes
112,462,6932,466,285+Yes
122,549,5552,730,999NDc
132,815,6252,821,149+Yes
143,008,7163,036,980+Yes
153,214,8203,219,550+ND
163,340,3933,384,549+Yes
173,392,5863,413,804+ND
183,523,4173,527,334+/−Yes
193,670,5183,675,686+Yes
203,917,7523,939,034+/−Yes
214,254,5944,261,488+/−Yes
225,122,3715,132,301+Yes
235,174,6415,270,187+Yes
245,378,9035,395,102+Yes
  • a Coordinates of start and end of island based on the genome sequence of M. avium subsp. avium strain 104.

  • b + or − denotes the presence or absence of genomic regions in the examined genomes, while +/− denotes an incomplete deletion.

  • c ND, not done.