TABLE 3.

Induction of genes in defending against oxidative stress in MR-1 following IR irradiation

Gene IDGene nameCOG annotationRelative gene expression or TDEST valuea
T5P5T20P20T60P60
SO0956ahpFAlkyl hydroperoxide reductase, large subunit4.130.011.140.681.070.84
SO0958ahpCPeroxiredoxin11.250.001.970.091.070.98
SO3577clpBATPase with chaperone activity, ATP-binding subunit1.160.440.960.782.970.01
SO4162hslVATP-dependent protease HslVU (ClpYQ), peptidase subunit1.060.791.060.844.060.03
SO4163hslUATP-dependent protease HslVU (ClpYQ), ATPase subunit0.950.601.110.663.420.01
SO4697gstGlutathione S-transferase0.920.741.300.393.680.01
SO0452trxCThioredoxin2.080.101.750.012.410.01
SO0760amtAmmonia permease1.450.772.030.001.030.96
SO1070katBCatalase14.890.021.620.921.440.86
SO1145mgtE-1Mg/Co/Ni transporter MgtE (contains CBS domain)0.960.851.560.305.800.04
SO1158DNA-binding ferritin-like protein (oxidative damage protectant)3.090.011.280.491.070.93
SO2178ccpACytochrome c peroxidase3.940.011.290.330.860.35
SO4423.1Outer membrane receptor proteins, related to Fe transport1.280.292.740.042.700.18
SO2881sodBSuperoxide dismutase, Fe1.510.040.910.690.660.37
  • a T5, T20, and T60, relative gene expression at 5, 20, and 60 min, respectively. P5, P20, and P60, P values at 5, 20, and 60 min, respectively.