TABLE 1.

Genes and gene products of φSE14 in S. enterica serovar Enteritidis NCTC13349

GeneAlternative name(s)CoordinatesaProduct size (aa)dPredicted functional identification and/or description of productHomolog encoded in S. Typhi strain CT18 (% identity to gene product)
SEN1377bydaO, ttcA1468428-1469363 (complement)311C32 tRNA thiolase (enzyme for thiolation of cytidine in position 32 of tRNA)e
SEN1378cint1469415-1469696 (complement)93Putative integrase (identical to portion of Rac prophage integrase); truncated protein
SEN1379clygA1469680-1470303 (complement)207Putative phage-encoded exodeoxyribonuclease VIII; truncated version of RecE
SEN1380lygB1470325-1470642 (complement)105Predicted phage protein with unknown function
SEN1381kil1470727-1470948 (complement)73Putative FtsZ inhibitor protein Kil (analogous to Rac prophage protein); cell division inhibitor
SEN1382lygC1471371-1471907178Putative membrane protein related to phage superinfection exclusion proteins
SEN1383lygD1472555-1473022 (complement)155Putative DNA binding protein belonging to the xenobiotic response element (XRE) family of transcriptional regulators
SEN1384lygF1473295-1473624109Putative phage-encoded DNA binding protein
SEN13851473786-1474340 (complement)184Putative phage-encoded membrane protein with unknown functionPutative protein STY2058 (99)
SEN13861474337-1475269 (complement)310Predicted phage protein with unknown functionPutative protein STY2057 (95)
SEN1387hok, mok1475639-147585170Putative small toxic protein in the Hok/Gef family of prophage maintenance proteinsPutative protein STY2054 (92)
SEN13881476127-147631261Predicted phage protein with unknown function
SEN13891476375-1476974199Hypothetical protein with unknown functionPutative protein STY2052 (87)
SEN13901476974-147726496Putative phage protein with unknown functionPutative protein STY2051 (85)
SEN13911477141-1477797218Putative phage antitermination proteinPutative protein STY2050 (80)
SEN13921479296-147954482Predicted phage protein with unknown function
SEN13931479968-1480363131Putative phage protein homologous to plasmid and bacterial tellurite and colicin resistance determinants TerB and its homologs
SEN13941480457-148074495Putative prophage holin protein
SEN13951480741-1481286181Predicted lysozyme protein
SEN13961481283-148149269Putative phage-encoded exported protein with unknown function
SEN1396AcydaO′, ttcA1481723-1481776 (complement)17C32 tRNA thiolase (enzyme for thiolation of cytidine in position 32 of tRNA); truncated protein
SEN1398cint1481828-1481968 (complement)46Putative integrase (identical to portion of Rac prophage integrase); truncated protein
  • a Coordinates are those of the S. Enteritidis NCTC13349 sequence (EMBL accession number AM933172).

  • b φSE14 carries 21 annotated genes (SEN1378 to SEN1398) in the genome of S. Enteritidis NCTC13349. The features of the neighboring gene SEN1377 (also called ydaO or ttcA) are included as a reference.

  • c Predicted pseudogene.

  • d aa, amino acids.

  • e Data are from reference 36.