TABLE 5.

Genes that were pseudogenes in Ty2 but intact in CT18

ORFGeneProductMutation
Ty2CT18
t2523STY0371 stbC Outer membrane fimbrial usher proteinInternal stop codon
t2474STY0423 aroM AroM proteinFrameshift
t1913STY1027Hypothetical bacteriophage proteinInternal stop codon
t1549STY1423Putative exported proteinFrameshift
t1490STY1485 narV Respiratory nitrate reductase 2 gamma chainDeletion fuses two ORFs into one
STY1486 narW Respiratory nitrate reductase 2 delta chainDeletion fuses two ORFs into one
t1429STY1553Putative d-mannonate oxidoreductaseInternal stop codon
t1183STY1810 astA Arginine N-succinyltransferaseFrameshift
t1166STY1829Putative regulatory proteinFrameshift
t0706STY2379 stcC or yehBPutative outer membrane usher proteinFrameshift
t2688STY2913 gabP GabA permease (4-aminobutyrate transport carrier)Internal stop codon
t4529STY4832Bacteriophage P4 DNA primaseFrameshift